期刊論文
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熱帶植物與微生物科學研究所專任教師 105-109年度SCI期刊論文發表 |
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105-109年度(7月截止)總計：發表篇數共46篇，平均每年發表9.2篇，教師總數5人，平均每位教師發表1.8篇，平期刊排名為20.9% |
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※依年度及教師排序 |
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| 序號 | 年度 | 西元年 | 教師 | 篇名 | 領域 | 期刊排名 (%) | |||
| 1 | 109 | 2020 | 蔡文杰 | Chen, Y. C., Li, Z., Zhao, Y. X., Gao, M., Wang, J. Y., Liu, K. W., Wang, X., Wu, L. W., Jiao, Y. L., Xu, Z. L., He, W. G., Zhang, Q. Y., Liang, C. K., Hsiao, Y. Y., Zhang, D. Y., Lan, S. R., Huang, L., Xu, W., Tsai, W. C., ... Wang, Y. D. (2020). The Litsea genome and the evolution of the laurel family. Nature communications, 11(1). | MULTIDISCIPLINARY SCIENCES | 7.25% | |||
| 2 | 109 | 2020 | 蔡文杰 | Zhang, Y., Zhou, T., Dai, Z., Dai, X., Li, W., Cao, M., Li, C., Tsai, W. C., Wu, X., Zhai, J., Liu, Z., & Wu, S. (2020). Comparative transcriptomics provides insight into floral color polymorphism in a pleione limprichtii orchid population. International journal of molecular sciences, 21(1), [247]. | CHEMISTRY, MULTIDISCIPLINARY | 26.74% | |||
| 3 | 109 | 2020 | 蔡文杰 | Wu, W.L., Hsiao, Y.Y., Lu, H.C., Liang, C.K., Fu, C.H., Huang, T.H., Chuang, M.H., Chen, L,J., Liu, Z.J. and Tsai, W.C. Expression regulation of MALATE SYNTHASE involved in glyoxylate cycle during protocorm development in Phalaenopsis aphrodite (Orchidaceae). Scientific Reports | MULTIDISCIPLINARY SCIENCES | 22.10% | |||
| 4 | 109 | 2020 | 蔡文杰 | Wu, S., Sun, W., Xu, Z., Zhai, J., Li, X, Li, C., Dai, Z., Wu, X., Shen, L., Chen, J, Ren, H., Dai, X., Dai, Z., Zhao, Y., Chen, L., Cao, M., Xie, X., Liu, X., Peng, D., Dong, J., Hsiao, Y.Y., Chen, S.L., Tsai, W.C.※, Lan, S. and Liu, Z.J. 2020. The genome sequence of star fruit (Averrhoa carambola). Horticultural Research | HORTICULTURE | 8.30% | |||
| 5 | 109 | 2020 | 蔡文杰 | 52. Hu, M.J., Sun, W.H., Tsai, W.C., Xiang, S., Lai, X.K., Chen, D.Q., Liu, X.D., Wang, Y.F., Le, Y.X., Chen, S.M., Zhang, D.Y., Yu, X., Hu, W.Q., Zhou, Z., Chen, Y.Q., Zou, S.Q. and Liu, Z.J 2020. Chromosome-scale assembly of the Kandelia obovata genome. Horticultural Research | HORTICULTURE | 8.30% | |||
| 6 | 109 | 2020 | 黃兆立 | Chen, C. H., Huang, C. L., He, M. S., Huang, F. C., & Lin, W. C. (2020). Characterisation of the β-lactam resistance enzyme in Acanthamoeba castellanii. International journal of antimicrobial agents, 55(2), [105823]. | MICROBIOLOGY | 21.80% | |||
| 7 | 109 | 2020 | 黃兆立 | Vu, T.D. Y. Iwasaki, S. Shigenobu, A. Maruko, K. Oshima, E. Iioka, C. L. Huang, T. Abe, S. Tamaki1, Y. W. Lin, C. K. Chen, M. Y. Lu, M. Hojo, H. V. Wang, S. F. Tzeng, H. J. Huang, A. Kanai, T. Gojobori1, T. Y. Chiang, H. S. Sun, W. H. Li, N. Okada. (2020). Behavioral and brain- transcriptomic synchronization between the two opponents of a fighting pair of the fish Betta splendens. PLOS GENETICS. | Genetics & Heredity | 12.93% | |||
| 8 | 109 | 2020 | 張文綺 | Tseng K.C., Chiang-Hsieh Y.F., Pai H., Wu N.Y., Zheng H.Q., Chow C.N., Lee T.Y., Chang S.B., Lin N.S., Chang W.C. (2020). sRIS: a small RNA illustration system for plant next-generation sequencing data analysis. Plant and Cell Physiology, pcaa034 | PLANT SCIENCES | 10.09% | |||
| 9 | 109 | 2020 | 邱啟洲 | Huai-Syuan Ciou, Yu-Lun Tsai and Chi-Chou Chiu*. (2020) Arabidopsis chloroplast J protein DJC75/CRRJ mediates nitrate-promoted seed germination in the dark. Annals of Botany. | Plant Sciences | 15.79% | |||
| ◆109年度(7月截止)小計：發表篇數9篇，共4位教師發表，教師總數5人，平均每位教師發表1.8篇，平均期刊排名為14.8% | |||||||||
| 序號 | 年度 | 西元年 | 教師 | 篇名 | 領域 | 期刊排名 (%) | |||
| 1 | 108 | 2019 | 蔡文杰 | Sun, W., Yuan, X., Liu, Z. J., Lan, S., Tsai, W. C., & Zou, S. Q. (2019). Multivariate analysis reveals phenotypic diversity of Euscaphis japonica population. PloS one, 14(7), [e0219046]. | MULTIDISCIPLINARY SCIENCES | 34.78% | |||
| 2 | 108 | 2019 | 蔡文杰 | Ramya, M., Park, P. H., Chuang, Y. C., Kwon, O. K., An, H. R., Park, P. M., Baek, Y. S., Kang, B. C., Tsai, W. C., & Chen, H. H. (2019). RNA sequencing analysis of Cymbidium goeringii identifies floral scent biosynthesis related genes. BMC Plant Biology, 19(1), [337]. | PLANT SCIENCES | 13.16% | |||
| 3 | 108 | 2019 | 蔡文杰 | Chuan Ming Yeh, Kwi Mi Chung, Chieh Kai Liang, Wen-Chieh Tsai. (2019). New insights into the symbiotic relationship between orchids and fungi. Applied Sciences (Switzerland), 9(3), [585]. | PHYSICS, APPLIED | 52.70% | |||
| 4 | 108 | 2019 | 蔡文杰 | Chia Chi Hsu, Pei Han Lai, Tien Chih Chen, Wen-Chieh Tsai, Jui Lin Hsu, Yu Yun Hsiao, Wen-Luan Wu, Ching Hsiu Tsai, Wen Huei Chen, Hong-Hwa Chen. (2019). PePIF1, a P-lineage of PIF-like transposable element identified in protocorm-like bodies of Phalaenopsis orchids. BMC genomics, 20(1), [25]. | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | 24.80% | |||
| 5 | 108 | 2019 | 黃兆立 張文綺 |
Huang, C. L., Sarkar, R., Hsu, T. W., Yang, C. F., Chien, C. H., Chang, W. C., & Chiang, T. Y.(2019). Endophytic Microbiome of Biofuel Plant Miscanthus sinensis (Poaceae) Interacts with Environmental Gradients. Microbial Ecology. | MICROBIOLOGY | 32.33% | |||
| 6 | 108 | 2019 | 黃兆立 | Tran HT, Wang HC, Hsu TW, Sarker R, Huang CL, Chiang TY. (2019) Revegetation on abandoned salt ponds relieves the seasonal fluctuation of soil microbiomes. BMC Genomics, 20:478. | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | 24.80% | |||
| 7 | 108 | 2019 | 張文綺 | Weijian Zhuang, Hua Chen, Meng Yang, Jianping Wang, Manish K. Pandey, Chong Zhang, Wen-Chi Chang, ... Rajeev K. Varshney. (2019). The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication. Nature Genetics, 51, 865–876. | GENETICS & HEREDITY | 1.20% | |||
| 8 | 108 | 2019 | 張文綺 | Kai Yao Huang, Tzong Yi Lee, Hui Ju Kao, Chen Tse Ma, Chao Chun Lee, Tsai Hsuan Lin, Wen-Chi Chang, Hsien Da Huang. (2019). DbPTM in 2019: Exploring disease association and cross-Talk of post-Translational modifications. Nucleic acids research, 47(D1), D298-D308. | BIOCHEMISTRY & MOLECULAR BIOLOGY | 3.40% | |||
| 9 | 108 | 2019 | 張文綺 | Chi Nga Chow, Tzong Yi Lee, Yu Cheng Hung, Guan Zhen Li, Kuan Chieh Tseng, Ya Hsin Liu, Po Li Kuo, Han Qin Zheng, Wen-Chi Chang. (2019). Plantpan3.0: A new and updated resource for reconstructing transcriptional regulatory networks from chip-seq experiments in plants. Nucleic acids research, 47(D1), D1155-D1163. | BIOCHEMISTRY & MOLECULAR BIOLOGY | 3.40% | |||
| 10 | 108 | 2019 | 張文綺 | Apitanyasai, K., Huang, S. W., Ng, T. H., He, S. T., Huang, Y. H., Chiu, S. P., Tseng, K. C., Lin, S. S., Chang, W. C., Baldwin-Brown, J. G., Long, A. D., Lo, C. F., Yu, H. T. & Wang, H. C. (2019). The gene structure and hypervariability of the complete Penaeus monodon Dscam gene. Scientific Reports, 9, 1, 16595. | MULTIDISCIPLINARY SCIENCES | 21.74% | |||
| 11 | 108 | 2019 | 張文綺 | Lin, Y. J., Chen, Y. C., Tseng, K. C., Chang, W. C., & Ko, S. S. (2019). Phototropins Mediate Chloroplast Movement in Phalaenopsis aphrodite (Moth Orchid). Plant and Cell Physiology, 60(10), 2243-2254. | PLANT SCIENCES | 10.09% | |||
| ◆108年度小計：發表篇數11篇，共3位教師發表，教師總數4.5人，平均每位教師發表2.4篇，平均期刊排名為20.2% | |||||||||
| 序號 | 年度 | 西元年 | 教師 | 篇名 | 領域 | 期刊排名 (%) | |||
| 1 | 107 | 2018 | 蔡文杰 | Yu Chen Chuang, Yi Chu Hung, Chi Yu Hsu, Chuan Ming Yeh, Nobutaka Mitsuda, Masaru Ohme-Takagi, Wen-Chieh Tsai, Wen Huei Chen, Hong-Hwa Chen. (2018). A dual repeat cis-element determines expression of GERANYL DIPHOSPHATE SYNTHASE for monoterpene production in phalaenopsis orchids. Frontiers in Plant Science, 9, [765]. | PLANT SCIENCES | 10.76% | |||
| 2 | 107 | 2018 | 蔡文杰 | Chuan Ming Yeh, Zhong Jian Liu, Wen-Chieh Tsai. (2018). Advanced Applications of Next-Generation Sequencing Technologies to Orchid Biology. Current Issues in Molecular Biology, 27, 51-70. | BIOCHEMISTRY & MOLECULAR BIOLOGY | 66.60% | |||
| 3 | 107 | 2018 | 蔡文杰 | Yu Chen Chuang, Yi Chu Hung, Wen-Chieh Tsai, Wen Huei Chen, Hong-Hwa Chen. (2018). PbbHLH4 regulates floral monoterpene biosynthesis in Phalaenopsis orchids. Journal of Experimental Botany, 69(18), 4363-4377. | PLANT SCIENCES | 6.28% | |||
| 4 | 107 | 2018 | 黃兆立 | Zheng, Y., Chiang, T-Y., Huang, C-L., & Gong, X. (2018). Highly diverse endophytes in roots of Cycas bifida (Cycadaceae), an ancient but endangered gymnosperm. Journal of Microbiology, 56(5), 337-345. | MICROBIOLOGY | 58.73% | |||
| 5 | 107 | 2018 | 張文綺 | Hou, P. F., Chien, C. H., Chiang-Hsieh, Y. F., Tseng, K. C., Chow, C. N., Huang, H-J., & Chang, W-C. (2018). Paddy-upland rotation for sustainable agriculture with regards to diverse soil microbial community. Scientific reports, 8(1), [7966]. | MULTIDISCIPLINARY SCIENCES | 18.75% | |||
| 6 | 107 | 2018 | 張文綺 | Chi Nga Chow, Yi Fan Chiang-Hsieh, Chia Hung Chien, Han Qin Zheng, Tzong Yi Lee, Nai Yun Wu, Kuan Chieh Tseng, Ping Fu Hou, Wen-Chi Chang. (2018). Delineation of condition specific Cis- and Trans-acting elements in plant promoters under various Endo- and exogenous stimuli. BMC genomics, 19, [85] | BIOTECHNOLOGY & APPLIED MICROBIOLOGY | 24.80% | |||
| 7 | 107 | 2018 | 張文綺 | Mazen Alazem, Kuan Chieh Tseng, Wen-Chi Chang, Jang Kyun Seo, Kook Hyung Kim. (2018). Elements Involved in the Rsv3-Mediated Extreme Resistance against an Avirulent Strain of Soybean Mosaic Virus. Viruses, 10(11) | VIROLOGY | 31.42% | |||
| 8 | 107 | 2018 | 張文綺 | Tseng, K. C., Chiang-Hsieh, Y. F., Pai, H., Chow, C. N., Lee, S. C., Zheng, H. Q., ... Chang, W-C. (2018). MicroRPM: A microRNA prediction model based only on plant small RNA sequencing data. Bioinformatics, 34(7), 1108-1115. | MATHEMATICAL & COMPUTATIONAL BIOLOGY | 5.10% | |||
| 9 | 107 | 2018 | 張文綺 | Tze Hann Ng, Chia Wei Lu, Shih Shun Lin, Che Chih Chang, Loc H. Tran, Wen-Chi Chang, Chu-Fang Lo, Han-Ching Wang. (2018). The Rho signalling pathway mediates the pathogenicity of AHPND-causing V. parahaemolyticus in shrimp. Cellular Microbiology, 20(8), [e12849]. | MICROBIOLOGY | 19.80% | |||
| ◆107年度小計：發表篇數9篇，共3位教師發表，教師總數4人，平均每位教師發表2.3篇，平均期刊排名為26.9% | |||||||||
| 序號 | 年度 | 西元年 | 教師 | 篇名 | 領域 | 期刊排名 (%) | |||
| 1 | 106 | 2017 | 蔡文杰 | Chuan-Ming Yeh, Masaru Ohme-Takagi and Wen-Chieh Tsai. (2017). Current understanding on the roles of ethylene in plant responses to phosphate deficiency. Int. J. Plant Biol. 5(1):1058. | PLANT SCIENCES | 51.32% | |||
| 2 | 106 | 2017 | 蔡文杰 | Wen-Chieh Tsai, Anne Dievart, Chia Chi Hsu, Yu Yun Hsiao, Shang Yi Chiou, Hsin Huang, Hong-Hwa Chen. (2017). Post genomics era for orchid research. Botanical Studies, 58(1), [61]. | PLANT SCIENCES | 50.67% | |||
| 3 | 106 | 2017 | 蔡文杰 | Zhang, G.Q., Liu, K.W., Li, Z., Lohaus, R., Hsiao, Y.Y., Niu, S.C., Wang, J.Y., Lin, Y.C., Xu, Q., Chen, L.J., Yoshida, K., Fujiwara, S., Wang, Z.W., Zhang, Y.Q., Mitsuda, N., Wang, M., Liu, G.H., Pecoraro, L., Huang, H.X., Xiao, X.J., Lin, M., Wu, X.Y., Wu, W.L., Chen, Y.Y., Chang, S.B., Sakamoto, S., Ohme-Takagi, M., Yagi, M., Zeng, S.J., Shen, C.Y., Yeh, C.M*, Luo, Y.B.*, Tsai, W.C.*, Van de Peer, Y.*, Liu, Z.J.*. (2017). The Apostasia genome and the evolution of orchids. Nature 579: 379-383. | MULTIDISCIPLINARY SCIENCES | 1.56% | |||
| 4 | 106 | 2017 | 黃兆立 張文綺 黃浩仁 |
Chung Wen Lin, Li Yao Huang, Chao-Li Huang, Yong Chuan Wang, Pei Hsuan Lai, Hao-Ven Wang, Wen-Chi Chang, Tzen-Yuh Chiang, Hao-Jen Huang. (2017). Common stress transcriptome analysis reveals functional and genomic architecture differences between early and delayed response genes. Plant and Cell Physiology, 58(3), 546-559. | PLANT SCIENCES | 8.10% | |||
| 5 | 106 | 2017 | 黃兆立 | Xun Gong, Kuo Hsiang Hung, Yu Wei Ting, Tsai Wen Hsu, Lenka Malikova, Huyen Trang Tran, Chao-Li Huang, Shih Hui Liu, Tzen-Yuh Chiang. (2017). Frequent gene flow blurred taxonomic boundaries of sections in Lilium L. (Liliaceae). PLoS One, 12(8), [e0183209]. | MULTIDISCIPLINARY SCIENCES | 23.40% | |||
| 6 | 106 | 2017 | 張文綺 黃兆立 黃浩仁 |
Chung Wen Lin, Li Yao Huang, Chao-Li Huang, Yong Chuan Wang, Pei Hsuan Lai, Hao-Ven Wang, Wen-Chi Chang, Tzen-Yuh Chiang, Hao-Jen Huang. (2017). Common stress transcriptome analysis reveals functional and genomic architecture differences between early and delayed response genes. Plant and Cell Physiology, 58(3), 546-559. | PLANT SCIENCES | 8.10% | |||
| 7 | 106 | 2017 | 張文綺 | Zheng, H. Q., Wu, N. Y., Chow, C. N., Tseng, K. C., Chien, C. H., Hung, Y. C., ... Chang, W-C. (2017). EXPath tool—a system for comprehensively analyzing regulatory pathways and coexpression networks from high-throughput transcriptome data. DNA Research, 24(4), 371-375. | GENETICS & HEREDITY | 13.50% | |||
| 8 | 106 | 2017 | 邱啟洲 | Lin, C. S., Chen, J. J. W., Chiu, C-C., Hsiao, H. C. W., Yang, C. J., Jin, X. H., ... Shih, M. C. (2017). Concomitant loss of NDH complex-related genes within chloroplast and nuclear genomes in some orchids. Plant Journal, 90(5), 994-1006. | PLANT SCIENCES | 5.38% | |||
| 9 | 106 | 2017 | 李瑞花 黃浩仁 |
Huang, L. Y., Lin, C. W., Lee, R-H., Chiang, C. Y., Wang, Y. C., Chang, C. H., & Huang, H-J. (2017). Integrating early transcriptomic responses to rhizotoxins in rice (Oryza sativa. L.) reveals key regulators and a potential early biomarker of cadmium toxicity. Frontiers in Plant Science, 8, [1432]. | PLANT SCIENCES | 10.76% | |||
| ◆106年度小計：發表篇數13篇，共5位教師發表，教師總數4.5人，平均每位教師發表2.0篇，平均期刊排名為19.2% | |||||||||
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序號 |
年度 |
西元年 |
教師 |
篇名 |
領域 |
期刊排名 (%) |
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1 |
105 |
2016 |
蔡文杰 |
Shan Ce Niu, Qing Xu, Guo Qiang Zhang, Yong Qiang Zhang, Wen-Chieh Tsai, Jui Ling Hsu, Chieh Kai Liang, Yi Bo Luo, Zhong Jian Liu. (2016). De novo transcriptome assembly databases for the butterfly orchid Phalaenopsis equestris. Scientific Data, 3, [201683]. |
MULTIDISCIPLINARY SCIENCES |
12.50% |
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2 |
105 |
2016 |
蔡文杰 |
Yu Fu Lin, You Yi Chen, Yu Yun Hsiao, Ching Yu Shen, Jui Ling Hsu, Chuan Ming Yeh, Nobutaka Mitsuda, Masaru Ohme-Takagi, Zhong Jian Liu, Wen-Chieh Tsai. (2016). Genome-wide identification and characterization of TCP genes involved in ovule development of Phalaenopsis equestris. Journal of Experimental Botany, 67(17), 5051-5066. |
PLANT SCIENCES |
6.28% |
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3 |
105 |
2016 |
蔡文杰 |
Xiaobai Li, Aaron Jackson, Ming Xie, Dianxing Wu, Wen-Chieh Tsai, Sheng Zhang. (2016). Proteomic insights into floral biology. Biochimica et Biophysica Acta-Proteins and Proteomics, 1864(8), 1050-1060. |
BIOPHYSICS |
44.40% |
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4 |
105 |
2016 |
蔡文杰 |
Zhang, G. Q., Xu, Q., Bian, C., Tsai, W-C., Yeh, C. M., Liu, K. W., ... Liu, Z. J. (2016). The Dendrobium catenatum Lindl. genome sequence provides insights into polysaccharide synthase, floral development and adaptive evolution. Scientific reports, 6, [19029]. |
MULTIDISCIPLINARY SCIENCES |
18.75% |
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5 |
105 |
2016 |
黃兆立 |
Chi Chun Huang, Tsai Wen Hsu, Hao-Ven Wang, Zin Huang Liu, Yi Yen Chen, Chi Te Chiu, Chao-Li Huang, Kuo Hsiang Hung, Tzen-Yuh Chiang. (2016). Multilocus analyses reveal postglacial demographic shrinkage of juniperus morrisonicola (cupressaceae), a dominant alpine species in Taiwan. PLoS ONE, 11(8), [e0161713]. |
MULTIDISCIPLINARY SCIENCES |
34.80% |
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6 |
105 |
2016 |
張文綺 |
Chang, W-C., Zheng, H. Q., & Chen, C. N. N. (2016). Comparative transcriptome analysis reveals a potential photosynthate partitioning mechanism between lipid and starch biosynthetic pathways in green microalgae. Algal Research-Biomass Biofuels and Bioproducts, 16, 54-62. |
BIOTECHNOLOGY & APPLIED MICROBIOLOGY |
23.60% |
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7 |
105 |
2016 |
張文綺 |
Chow, C. N., Zheng, H. Q., Wu, N. Y., Chien, C. H., Huang, H. D., Lee, T. Y., ... Chang, W-C. (2016). PlantPAN 2.0: An update of Plant Promoter Analysis Navigator for reconstructing transcriptional regulatory networks in plants. Nucleic Acids Research, 44(D1), D1154-D1164. |
BIOCHEMISTRY & MOLECULAR BIOLOGY |
3.41% |
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8 |
105 |
2016 |
李瑞花 |
B. Y. Lin, C. D. Chang, Lynn Ling-Huei Huang, Y. C. Liu, Y. Y. Su, T. C. Chen, Ruey-Hua Lee, Hao-Jen Huang, Wen-Luan Wu, Ching-Chun Chang. (2016). The mitochondrial DNA markers for distinguishing Phalaenopsis species and revealing maternal phylogeny. Biologia Plantarum, 60(1), 68-78. |
PLANT SCIENCES |
49.78% |
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◆105年度小計：發表篇數8篇，共4位教師發表， 教師總數5人，平均每位教師發表1.6篇，平均期刊排名為24.2% |
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